BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C08SP1|AL425835
(770 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1496 0.0
>3x_Contig1682
Length = 16889
Score = 1496 bits (752), Expect = 0.0
Identities = 762/768 (99%)
Strand = Plus / Plus
Query: 1 atcttgtaaaggtttggcaccgatattttgcwacgatcttttgatttgatcaagtgaaat 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 12310 atcttgtaaaggtttggcaccgatattttgcaacgatcttttgatttgatcaagtgaaat 12369
Query: 61 gttatcccccagcttggtgttaggtcctacacatgcagtaataccggacatatcagtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12370 gttatcccccagcttggtgttaggtcctacacatgcagtaataccggacatatcagtcat 12429
Query: 121 cttgtgggtatgcaccttcaaagtattggaccagaattttcctgaagtggtattcaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12430 cttgtgggtatgcaccttcaaagtattggaccagaattttcctgaagtggtattcaagag 12489
Query: 181 taacttgaactcgtattcgaagtctaccgagagaccagaaatcttaaggctgttgttatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12490 taacttgaactcgtattcgaagtctaccgagagaccagaaatcttaaggctgttgttatc 12549
Query: 241 agtagttccatcccggtttgatcctggagtgattacttggtgcctatttccttgcttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12550 agtagttccatcccggtttgatcctggagtgattacttggtgcctatttccttgcttgta 12609
Query: 301 caagattagcgatttcaattgagacgaacccagatggattgggtcccaatggataacgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12610 caagattagcgatttcaattgagacgaacccagatggattgggtcccaatggataacgca 12669
Query: 361 acttgtttgagtagcattcgagagatgtaaaacgggctctgctggaggatcggtaccata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12670 acttgtttgagtagcattcgagagatgtaaaacgggctctgctggaggatcggtaccata 12729
Query: 421 cttggcgagaatttgttcttgcacactttgaaacttctttttctgtttaatctcttgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12730 cttggcgagaatttgttcttgcacactttgaaacttctttttctgtttaatctcttgttc 12789
Query: 481 taagtcttgttcaacagtaatggtaacgacagaccctgcttccactgattctggtaataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12790 taagtcttgttcaacagtaatggtaacgacagaccctgcttccactgattctggtaataa 12849
Query: 541 wacggtaggaaattcgataacgtagtgntctgcagtcgtgagaatggcgagcgacgctnc 600
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 12850 aacggtaggaaattcgataacgtagtggtctgcagtcgtgagaatggcgagcgacgcgtc 12909
Query: 601 gactttcccgacggtgagcgatacttcgaccataattkctaattgaggggtctagtgcgc 660
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 12910 gactttcccgacggtgagcgatacttcgaccataattgctaattgaggggtctagtgcgc 12969
Query: 661 gttaagcctgtgtaattgtgcactattttccctttgacaatctgttgttgtgtatattcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12970 gttaagcctgtgtaattgtgcactattttccctttgacaatctgttgttgtgtatattcc 13029
Query: 721 atagattcgaacttgtatatgtgtgctaaaatcaaatctgatatataa 768
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13030 atagattcgaacttgtatatgtgtgctaaaatcaaatctgatatataa 13077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4765
Number of Sequences: 1807
Number of extensions: 4765
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 770
length of database: 10,358,551
effective HSP length: 16
effective length of query: 754
effective length of database: 10,329,639
effective search space: 7788547806
effective search space used: 7788547806
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)